feat:
DimDataPlot(): New lightweight helper for plotting supplied 2D coordinates from data frames, with grouping, splitting, shape mapping, labels, palettes, theme controls, and optional group marks.StatPlot(): Added configurable major panel grid lines via grid_major, grid_major_colour, grid_major_linetype, and grid_major_linewidth.StatPlot(): Added optional venn_engine = "venny" support for more flexible 2-4 set Venn diagrams while keeping ggVennDiagram as the default.docs:
DimDataPlot().StatPlot() documentation for the new major grid controls.StatPlot() documentation and examples for the optional venny Venn backend.feat:
to_percent(): convert values to percentages after unit-sum normalization.annotate_quadrants(): add quadrant guide lines and percentage labels to scatter plots.clip_symmetric_range(): clip values to symmetric lower and upper limits.jitter_highlighted_points(): deterministically jitter highlighted points for stable plotting output.visual_colors(): add adaptive label layout via label_mode, with tighter HTML rendering for Chinese, pinyin, RGB, and hex labels.ChineseColors$visual_colors(): pass name_type through to the layout mode so different label types use matching display rules.get_chinese_palettes(): use color_sets$Chinese as the default Chinese palette and add a fallback palette definition when the dataset metadata is incomplete.docs:
annotate_quadrants(), clip_symmetric_range(), jitter_highlighted_points(), and to_percent().color_sets$Chinese palette.visual_colors() documentation for the new adaptive label layout mode.data:
ChineseColors().feat:
GraphPlot(): New function for graph visualization with node/edge layers, optional transition arrows, highlighting, labels, palettes, and theme customization.compute_velocity_on_grid(): New function to compute smoothed velocity vectors on an embedding grid, with optional adjustment for stream-style visualization.palette_colors(): Changed the default palette from "Paired" to "Chinese".docs:
annotation_block_fill_graphics() and build_heatmap_annotation().deps:
ggnewscale and reshape2 to Imports.StatPlot(): Optimized venn plot rendering by using coord_fixed(ratio = 1, clip = "off").annotation_block_fill_graphics()annotation_block_graphics()annotation_graphics()build_heatmap_annotation()cluster_within_group2()heatmap_fixsize()heatmap_rendersize()normalize_drawable()make_long(): Converts a wide data frame to long format for geom_sankey / geom_alluvial, with optional value column for weights.geom_sankey(): Sankey diagram layer (nodes and flows).geom_sankey_label(), geom_sankey_text(): Sankey node label layers.geom_alluvial(): Alluvial diagram layer.geom_alluvial_label(), geom_alluvial_text(): Alluvial label layers.geom_sankey_bump(): Sankey bump diagram layer.theme_sankey(), theme_alluvial(), theme_sankey_bump(): Themes for sankey/alluvial plots.feat:
StatPlot(): New function to visualize data using various plot types including bar plots, rose plots, ring plots, pie charts, trend plots, area plots, dot plots, sankey plots, chord plots, venn diagrams, and upset plots. Supports grouping, splitting, background coloring, and extensive customization options.docs:
StatPlot(): Added comprehensive parameter documentation for all function arguments including group.by, split.by, palette, palcolor, title, subtitle, xlab, ylab, legend.position, legend.direction, theme_use, theme_args, combine, nrow, ncol, byrow, force, and seed.StatPlot(): Updated examples to use generic test data instead of single-cell specific datasets, making the function more accessible as a general-purpose plotting tool.README: Converted from static Markdown to R Markdown (README.Rmd) for dynamic content generation. Code examples now execute and display actual output instead of static images.check_ci_env(): New function to detect if the current environment supports browsable HTML output. Now detects local pkgdown builds via IN_PKGDOWN environment variable and knitr HTML output contexts.head.colors(): New S3 method for colors objects, allowing the use of head() function to limit the number of displayed rows (default n = 6L).visual_colors(): Integrated htmltools::browsable functionality. Added browsable parameter (default NULL for auto-detection) to automatically display widgets in appropriate environments. Automatically detects interactive sessions and GitHub Actions pkgdown workflow, while preventing browser opening during CRAN checks.ChineseColors$visual_colors(): Added browsable parameter support, consistent with the global visual_colors() function.get_colors(): Now automatically infers RGB values from hex codes when colors are found in palettes but not in the main dataset. Added internal hex_to_rgb() helper function to convert hex color codes to RGB format strings.get_colors(): New function to search for colors in the Chinese colors dataset and all available palettes. Supports searching by palette names, color names (pinyin or Chinese), numbers, or hex codes. Automatically reports which palette(s) contain the found colors.print.colors(): New print method for colors objects to display color information with ANSI color support in terminal.feat:
ChineseColors(): New function to create a Chinese traditional color system object with 1058 representative colors extracted from traditional Chinese color charts. Supports accessing colors by name (pinyin or Chinese), number, or hex code, creating color palettes, and generating segmented colormaps.visual_colors(): New function to visualize colors in HTML format with a grid of color swatches, supporting optional names, RGB values, or hex codes.get_chinese_palettes(): New function to get Chinese color palettes organized by color categories (blue, green, yellow, red, brown, purple, etc.) with automatic continuous palette generation.data:
chinese_colors: New data object containing 1058 Chinese traditional colors.docs: